Einav Lab

Tal Einav, Ph.D.

The Bodman Family Assistant Professor

Laboratory for Computational Immunology
Center for Vaccine Innovation

Biology is no longer data-limited, and the success of machine learning approaches will depend on where and how creatively we apply them. This is where art meets science.

After decades of influenza research, we still do not know why vaccines elicit a strong antibody response in some but a negligible response in others. Studies have been conducted in the young and the elderly, across continents, and in humans, mice, ferrets, and swine. They have investigated the effects of different viral strains, transmission methods, and dosing schemes. While these efforts have revealed many processes underlying adaptive immunity, we still lack the ability to predict each person’s response to different vaccine candidates.

The Einav lab leverages the wealth of available data to create a fundamentally new form of personalized medicine that uses your specific antibody profile to determine which vaccine strain would maximally augment your protection. We use these algorithms to explore the limits and tradeoffs of possible immune responses; for example, will a stronger response also be more durable, or is there a tug-of-war between these two traits?

We seek a deep understanding of immunity, and hence the primary tools of our trade include interpretable machine learning algorithms and biophysical models. Our definition of success is to determine actionable “laws of the immune system” that will help us design better vaccines.

Featured Publications

Jul 23, 2020
Tal Einav, Lauren E. Gentles, Jesse D. Bloom
Stacey H, Carlock MA, Allen JD, Hanley HB, Crotty S, Ross TM, Einav T
Yang B, Gostic KM, Adam DC, Zhang R, Einav T, Peng L, Wong SS, Tsang TK, Cummings DAT, Sullivan SG, Cobey S, Cowling BJ

Lab Members

Tal Einav, Ph.D.

Assistant Professor

Luis Fenoy, Ph.D.

Postdoctoral Fellow

Riya Fernando

Student Trainee

Anshul Govindu

Student Trainee

Soo Min Lee, Masters

UCSD Graduate Student

Sierra Orsinelli-Rivers

Associate Bioinformatics Specialist I

Research Projects

The human immune system is a vast, interconnected network, yet most studies only look at one piece of the puzzle. Our lab is building a comprehensive systems-level map to predict [...]

Current antibody assays are akin to viewing the Earth from 30,000 feet: You can see the broad landscape, but not the fine details. We are bringing the view of the [...]

Influenza vaccine responses are highly heterogeneous, eliciting strong and durable immunity in some but little-to-no response in others. Our lab is bridging the gap between infant, adult, and elderly immunology [...]

From the Lab

Meet the LJI scientists changing medical research through artificial intelligence
LJI scientists find that a person's past vaccine response—not age, sex, or vaccine dose—is the best predictor of future vaccine responses
Fleet's Sharp Minds lecture series to feature immune system experts
Computational biologists harness machine learning to make sense of immune system data
The Einav lab aims to stop deadly viruses by leveraging the vast wealth of data we acquire on the immune system

Contact Lab Members

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