Publications

All      Ay      Benedict       Cheroutre       Croft       Crotty      Einav       Grifoni       Hogan       Kronenberg      Lisdestam Arlehamn      Myers      Peters      Rao      Reina      Saphire      Schmiedel      Schoenberger      Sette      Sharma      Shresta      Vijayanand      Weiskopf

Altman             Eschweiler      Hedrick       Kawakami      Ley      Pandurangan      Seumois      Von Herrath      
05/26/2026
  • medRxiv

The Birth of Influenza Immunity: High-Resolution Antibody Dynamics Driven by Maternal Antibody Waning, Vaccinations, and Infections during the first Two Years of Life

Soo Min Lee, Allison R. Burrell, Sara Spranger, Shannon C. Conrey, Brendon White, Ardythe L. Morrow, Daniel C. Payne, Mary Allen Staat, Tal Einav
01/15/2026
  • medRxiv

The Decline in Influenza Antibody Titers and Modifiers of Vaccine Immunity from over Ten Years of Serological Data

Emilio Fenoy, Ewan P Plant, Hang Xie, Zhiping Ye, Arush Tagade, Jessica Rumbelow, Tal Einav
03/31/2025
  • PLoS Computational Biology

Putting computational models of immunity to the test-An invited challenge to predict B.pertussis vaccination responses

Shinde P, Willemsen L, Anderson M, Aoki M, Basu S, Burel JG, Cheng P, Ghosh Dastidar S, Dunleavy A, Einav T, Forschmiedt J, Fourati S, Garcia J, Gibson W, Greenbaum JA, Guan L, Guan W, Gygi JP, Ha B, Hou J, Hsiao J, Huang Y, Jansen R, Kakoty B, Kang Z, Kobie JJ, Kojima M, Konstorum A, Lee J, Lewis SA, Li A, Lock EF, Mahita J, Mendes M, Meng H, Neher A, Nili S, Olsen LR, Orfield S, Overton JA, Pai N, Parker C, Qian B, Rasmussen M, Reyna J, Richardson E, Safo S, Sorenson J, Srinivasan A, Thrupp N, Tippalagama R, Trevizani R, Ventz S, Wang J, Wu CC, Ay F, Grant B, Kleinstein SH, Peters B
02/01/2025
  • medRxiv

Characterizing the Short- and Long-Term Temporal Dynamics of Antibody Responses to Influenza Vaccination

Lane A, Quach HQ, Ovsyannikova IG, Kennedy RB, Ross TM, Einav T
04/03/2025
  • Biophys J.

Glycolysis model shows that allostery maintains high ATP and limits accumulation of intermediates

Choe M, Einav T, Phillips R, Titov DV
07/01/2025
  • Nat Microbiol

Breadth of influenza A antibody cross-reactivity varies by virus isolation interval and subtype

Yang B, Gostic KM, Adam DC, Zhang R, Einav T, Peng L, Wong SS, Tsang TK, Cummings DAT, Sullivan SG, Cobey S, Cowling BJ
06/01/2025
  • EBioMedicine

Leveraging pre-vaccination antibody titres across multiple influenza H3N2 variants to forecast the post-vaccination response

Stacey H, Carlock MA, Allen JD, Hanley HB, Crotty S, Ross TM, Einav T
03/31/2025
  • PLoS Computational Biology

Putting computational models of immunity to the test-An invited challenge to predict B.pertussis vaccination responses

Shinde P, Willemsen L, Anderson M, Aoki M, Basu S, Burel JG, Cheng P, Ghosh Dastidar S, Dunleavy A, Einav T, Forschmiedt J, Fourati S, Garcia J, Gibson W, Greenbaum JA, Guan L, Guan W, Gygi JP, Ha B, Hou J, Hsiao J, Huang Y, Jansen R, Kakoty B, Kang Z, Kobie JJ, Kojima M, Konstorum A, Lee J, Lewis SA, Li A, Lock EF, Mahita J, Mendes M, Meng H, Neher A, Nili S, Olsen LR, Orfield S, Overton JA, Pai N, Parker C, Qian B, Rasmussen M, Reyna J, Richardson E, Safo S, Sorenson J, Srinivasan A, Thrupp N, Tippalagama R, Trevizani R, Ventz S, Wang J, Wu CC, Ay F, Grant B, Kleinstein SH, Peters B
02/01/2025
  • medRxiv

Characterizing the Short- and Long-Term Temporal Dynamics of Antibody Responses to Influenza Vaccination

Lane A, Quach HQ, Ovsyannikova IG, Kennedy RB, Ross TM, Einav T
04/03/2025
  • Biophys J.

Glycolysis model shows that allostery maintains high ATP and limits accumulation of intermediates

Choe M, Einav T, Phillips R, Titov DV
07/01/2023
  • Cell Rep Methods

Using interpretable machine learning to extend heterogeneous antibody-virus datasets

Einav T, Ma R.
04/23/2023
  • Physical Review X

Quantitatively visualizing bipartite datasets

Einav T, Khoo Y, Singer A.