Publications

Jul 15, 2021 J Immunol.

HLA-DR marks recently divided antigen-specific effector CD4 T cells in active tuberculosis patients.

Tippalagama R, Singhania A, Dubelko P, Lindestam Arlehamn CS, Crinklaw A, Pomaznoy M, Seumois G, deSilva AD, Premawansa S, Vidanagama D, Gunasena B, Goonawardhana NDS, Ariyaratne D, Scriba TJ, Gilman RH, Saito M, Taplitz R, Vijayanand P, Sette A, Peters B, Burel JG.

Jul 14, 2021 Cell Host Microbe.

SARS-CoV-2 human T cell epitopes: adaptive immune response against COVID-19.

Grifoni A, Sidney J, Vita R, Peters B, Crotty S, Weiskopf D, Sette A.

Jul 9, 2021 Database (Oxford).

Standardization of assay representation in the ontology for biomedical investigations.

Vita R, Zheng J, Jackson R, Dooley D, Overton JA, Miller MA, Berrios DC, Scheuermann RH, He Y, McGinty HK, Brochhausen M, Lin AY, Jain SB, Chibucos MC, Judkins J, Giglio MG, Feng IY, Burns G, Brush MH, Peters B, Stoeckert CJ Jr.

Apr 8, 2021 JCI Insight.

A system-view of Bordetella pertussis booster vaccination responses in adults primed with whole-cell versus acellular vaccine in infancy.

da Silva Antunes R, Soldevila F, Pomaznoy M, Babor M, Bennett J, Tian Y, Khalil NN, Qian Y, Mandava A, Scheuermann RH, Cortese M, Pulendran B, Petro CD, Gilkes AP, Purcell LA, Sette A, Peters B.

Apr 1, 2021 Cytotherapy.

In vitro induction of neoantigen-specific T cells in myelodysplastic syndrome, a disease with low mutational burden.

Ferrari V, Tarke A, Fields H, Ferrari L, Conley T, Ferrari F, Koşaloğlu-Yalçın Z, Sette A, Peters B, McCarthy CL, Bashey A, Tzachanis D, Ball ED, Tanaka TN, Bejar R, Lane TA, Vitiello A.

Mar 27, 2021 Database (Oxford).

An immunologically friendly classification of non-peptidic ligands.

Edwards L, Jackson R, Overton JA, Vita R, Blazeska N, Peters B, Sette A.

Mar 15, 2021 J Immunol.

Functional analysis of immune signature genes in Th1* memory cells links ISOC1 and pyrimidine metabolism to IFN-g and IL-17 production.

Kushnareva Y, Mathews IT, Andreyev AY, Altay G, Lindestam Arlehamn CS, Pandurangan V, Nilsson R, Jain M, Sette A, Peters B, Sharma S.

Mar 11, 2021 Front Immunol.

Comparison of HLA ligand elution data and binding predictions reveals varying prediction performance for the multiple motifs recognized by HLA-DQ2.5.

Koşaloğlu-Yalçın Z, Sidney J, Chronister W, Peters B, Sette A.

Publications

HLA-DR marks recently divided antigen-specific effector CD4 T cells in active tuberculosis patients.

SARS-CoV-2 human T cell epitopes: adaptive immune response against COVID-19.

Standardization of assay representation in the ontology for biomedical investigations.

A system-view of Bordetella pertussis booster vaccination responses in adults primed with whole-cell versus acellular vaccine in infancy.

In vitro induction of neoantigen-specific T cells in myelodysplastic syndrome, a disease with low mutational burden.

An immunologically friendly classification of non-peptidic ligands.

Functional analysis of immune signature genes in Th1* memory cells links ISOC1 and pyrimidine metabolism to IFN-g and IL-17 production.

TCRMatch: predicting T-cell receptor specificity based on sequence similarity to previously characterized receptors.

B cells modulate mouse allergen-specific T cells in nonallergic laboratory animal-care workers.

Comprehensive analysis of T cell immunodominance and immunoprevalence of SARS-CoV-2 epitopes in COVID-19 cases.

Immunological memory to SARS-CoV-2 assessed for up to 8 months after infection.

Comparison of HLA ligand elution data and binding predictions reveals varying prediction performance for the multiple motifs recognized by HLA-DQ2.5.