Publications

Apr 1, 2021 Cytotherapy.

In vitro induction of neoantigen-specific T cells in myelodysplastic syndrome, a disease with low mutational burden.

Ferrari V, Tarke A, Fields H, Ferrari L, Conley T, Ferrari F, Koşaloğlu-Yalçın Z, Sette A, Peters B, McCarthy CL, Bashey A, Tzachanis D, Ball ED, Tanaka TN, Bejar R, Lane TA, Vitiello A.

Mar 27, 2021 Database (Oxford).

An immunologically friendly classification of non-peptidic ligands.

Edwards L, Jackson R, Overton JA, Vita R, Blazeska N, Peters B, Sette A.

Mar 15, 2021 J Immunol.

Functional analysis of immune signature genes in Th1* memory cells links ISOC1 and pyrimidine metabolism to IFN-g and IL-17 production.

Kushnareva Y, Mathews IT, Andreyev AY, Altay G, Lindestam Arlehamn CS, Pandurangan V, Nilsson R, Jain M, Sette A, Peters B, Sharma S.

Mar 11, 2021 Front Immunol.

TCRMatch: predicting T-cell receptor specificity based on sequence similarity to previously characterized receptors.

Chronister WD, Crinklaw A, Mahajan S, Vita R, Kosaloglu-Yalcin Z, Yan Z, Greenbaum JA, Jessen LE, Nielsen M, Christley S, Cowell LG, Sette A, Peters B.

Feb 22, 2021 JCI Insight.

B cells modulate mouse allergen-specific T cells in nonallergic laboratory animal-care workers.

Yu ED, Westernberg L, Grifoni A, Frazier A, Sutherland A, Wang E, Peters B, da Silva Antunes R, Sette A.

Feb 16, 2021 Cell Rep Med.

Comprehensive analysis of T cell immunodominance and immunoprevalence of SARS-CoV-2 epitopes in COVID-19 cases.

Tarke A, Sidney J, Kidd CK, Dan JM, Ramirez SI, Yu ED, Mateus J, da Silva Antunes R, Moore E, Rubiro P, Methot N, Phillips E, Mallal S, Frazier A, Rawlings SA, Greenbaum JA, Peters B, Smith DM, Crotty S, Weiskopf D, Grifoni A, Sette A.

Feb 5, 2021 Science.

Immunological memory to SARS-CoV-2 assessed for up to 8 months after infection.

Dan JM, Mateus J, Kato Y, Hastie KM, Yu ED, Faliti CE, Grifoni A, Ramirez SI, Haupt S, Frazier A, Nakao C, Rayaprolu V, Rawlings SA, Peters B, Krammer F, Simon V, Saphire EO, Smith DM, Weiskopf D, Sette A, Crotty S.

Feb 1, 2021 Immunology.

Comparison of HLA ligand elution data and binding predictions reveals varying prediction performance for the multiple motifs recognized by HLA-DQ2.5.

Koşaloğlu-Yalçın Z, Sidney J, Chronister W, Peters B, Sette A.

Jan 11, 2021 Sci Rep.

The TCR repertoire of a-synuclein-specific T cells in Parkinson’s disease is surprisingly diverse.

Singhania A, Pham J, Dhanwani R, Frazier A, Rezende Dutra J, Marder KS, Phillips E, Mallal S, Amara AW, Standaert DG, Sulzer D, Peters B, Sette A, Lindestam Arlehamn CS.

Jan 1, 2021 Mol Cell Proteomics.

Allele-specific thresholds of eluted ligands for T-cell epitope prediction.

Reardon B, Koşaloğlu-Yalçın Z, Paul S, Peters B, Sette A.

Jan 1, 2021 Cytokine.

Lack of evidence supporting a role of IFN-β and TGF-β in differential polarization of Bordetella pertussis specific-T cell responses.

da Silva Antunes R, Quiambao LG, Soldevila F, Sutherland A, Peters B, Sette A.

Jan 1, 2021 Nat Genet.

Promoter-interacting expression quantitative trait loci are enriched for functional genetic variants.

Chandra V, Bhattacharyya S, Schmiedel BJ, Madrigal A, Gonzalez-Colin C, Fotsing S, Crinklaw A, Seumois G, Mohammadi P, Kronenberg M, Peters B, Ay F, Vijayanand P.