Publications

May 1, 2013 Immunogenetics

Peptide-binding motifs associated with MHC molecules common in Chinese rhesus macaques are analogous to those of human HLA supertypes and include HLA-B27-like alleles

Mothé BR, Southwood S, Sidney J, English AM, Wriston A, Hoof I, Shabanowitz J, Hunt DF, Sette A

May 1, 2013 Proceedings of the National Academy of Sciences of the United States of America

Comprehensive analysis of dengue virus-specific responses supports an HLA-linked protective role for CD8+ T cells

Weiskopf D, Angelo MA, de Azeredo EL, Sidney J, Greenbaum JA, Fernando AN, Broadwater A, Kolla RA, De Silva AD, de Silva AM, Mattia KA, Doranz BJ, Grey HM, Shresta S, Peters B, Sette A

Apr 28, 2013 PLoS One

The nucleocapsid protein of rift valley fever virus is a ptent human CD8(+) T cell antigen and elicits memory responses

Xu W, Watts DM, Costanzo MC, Tang X, Venegas LA, Jiao F, Sette A, Sidney J, Sewell AK, Wooldridge L, Makino S, Morrill JC, Peters CJ, Kan-Mitchell J

Apr 1, 2013 Cancer Cell

Relapse or eradication of cancer is predicted by peptide-major histocompatibility complex affinity

Engels B, Engelhard VH, Sidney J, Sette A, Binder DC, Liu RB, Kranz DM, Meredith SC, Rowley DA, Schreiber H

Apr 1, 2013 European Journal of Immunology

Sculpting MHC class II-restricted self and non-self peptidome by the class I Ag-processing machinery and its impact of Th-cell responses

Spencer CT, Dragovic SM, Conant SB, Gray JJ, Zheng M, Samir P, Niu X, Moutaftsi M, Van Kaer L, Sette A, Link AJ, Joyce S

Apr 1, 2013 Journal of Biomedical Semantics

Query enhancement through the practical application of ontology: the IEDB and OBI

Vita R, Overton JA, Greenbaum JA, Sette A, OBI consortium, Peters B

Feb 1, 2013 Proceedings of the National Academy of Sciences of the United States of America

Previously undescribed grass pollen antigens are the major inducers of T helper 2 cytokine-producing T cells in allergic individuals

Schulten V, Greenbaum JA, Hauser M, McKinney DM, Sidney J, Kolla R, Lindestam Arlehamn CS, Oseroff C, Alam R, Broide DH, Ferreira-Briza F, Grey HM, Sette A, Peters B

Feb 1, 2013 Current Protocols in Immunology

Measurement of MHC/peptide interactions by gel filtration or monoclonal antibody capture

Sidney J, Southwood S, Moore C, Oseroff C, Pinilla C, Grey HM, Sette A

Jan 1, 2013 PLoS Neglected Tropical Diseases

T-cell memory responses elicited by yellow fever vaccine are targeted to overlapping epitopes containing multiple HLA-I and -II binding motifs

de Melo AB, Nascimento EJ, Braga-Neto U, Dhalia R, Silva AM, Oelke M, Schneck JP, Sidney J, Sette A, Montenegro SM, Marques ET

Jan 1, 2013 PLoS Computational Biology

Positional bias of MHC class I restricted T-cell epitopes in viral antigens is likely due to a bias in conservation

Kim Y, Yewdell JW, Sette A, Peters B

Jan 1, 2013 PLoS Pathogens

Memory T cells in latent Mycobacterium tuberculosis infection are directed against three antigenic islands and largely contained in a CXCR3+CCR6+ Th1 subset

Lindestam Arlehamn CS, Gerasimova A, Mele F, Henderson R, Swann J, Greenbaum JA, Kim Y, Sidney J, James EA, Taplitz R, McKinney DM, Kwok WW, Grey H, Sallusto F, Peters B, Sette A

Jan 1, 2013 Journal of Agricultural and Food Chemistry

Immunogenic peptides can be detected in whole gluten by transamidating highly susceptible glutamine residues: implication in the search for gluten-free cereals

Mamone G, Camarca A, Fierro O, Sidney J, Mazzarella G, Addeo F, Auricchio S, Troncone R, Sette A, Gianfranci C