Publications

Jan 2, 2018 J Exp Med

Novel and shared neoantigen derived from histone 3 variant H3.3K27M mutation for glioma T cell therapy

Chheda ZS, Kohanbash G, Okada K, Jahan N, Sidney J, Pecoraro M, Yang X, Carrera DA, Downey KM, Shrivastav S, Liu S, Lin Y, Lagisetti C, Chuntova P, Watchmaker PB, Mueller S, Pollack IF, Rajalingam R, Carcaboso AM, Mann M, Sette A, Garcia KC, Hou Y, Okada H

Jan 1, 2018 Immunology

Development of a strategy and computational application to select candidate protein analogues with reduced HLA binding and immunogenicity

Dhanda SK, Grifoni A, Pham J, Vaughan K, Sidney J, Peters B, Sette A

Jan 1, 2018 J Investig Dermatol Symp Proc

Large-scale epitope identification screen and its potential application to the study of alopecia areata

Lindestam Arlehamn CS, Paul S, Chun Wang EH, de Jong A, Christiano AM, Sette A

Jan 1, 2018 Methods Mol Biol

The identification of allergen-derived T cell epitopes

Schulten V, Sette A

Jan 1, 2018 Database (Oxford)

FAIR principles and the IEDB: short-term improvements and a long-term vision of OBO-foundry mediated machine-actionable interoperability

Vita R, Overton JA, Mungall CJ, Sette A, Peters B

Jan 1, 2018 Hum Immunol

Sequence-based HLA-A, B, C, DP, DQ, and DR typing of 339 adults from Managua, Nicaragua

Weiskopf D, Grifoni A, Arlehamn CSL, Angelo M, Leary S, Sidney J, Frazier A, Mack SJ, Phillips E, Mallal S, Cerpas C, Balmaseda A, Harris E, Sette A

Dec 21, 2017 PLoS Negl Trop Dis

Ontogeny of the B- and T-cell response in a primary Zika virus infection of a dengue-naïve individual during the 2016 outbreak in Miami, FL

Ricciardi MJ, Magnani DM, Grifoni A, Kwon YC, Gutman MJ, Grubaugh ND, Gangavarapu K, Sharkey M, Silveira CGT, Bailey VK, Pedreño-Lopez N, Gonzalez-Nieto L, Maxwell HS, Domingues A, Martins MA, Pham J, Weiskopf D, Altman J, Kallas EG, Andersen KG, Stevenson M, Lichtenberger P, Choe H, Whitehead SS, Sette A, Watkins DI

Nov 13, 2017 Nat Commun

Unique phenotypes and clonal expansions of human CD4 effector memory T cell re-expressing CD45RA

Tian Y, Babor M, Lane J, Schulten V, Patil VS, Seumois G, Rosales SL, Fu Z, Picarda G, Burel J, Zapardiel-Gonzalo J, Tennekoon RN, De Silva AD, Premawansa S, Premawansa G, Wijewickrama A, Greenbaum JA, Vijayanand P, Weiskopf D, Sette A, Peters, B

Nov 8, 2017 Sci Rep

Novel plasmodium antigens identified via genome-based antibody screen induce protection associated with polyfunctional T cell responses

Schussek S, Trieu A, Apte SH, Sidney J, Sette A, Doolan DL

Oct 13, 2017 Front Immunol

Global assessment of dengue virus-specific CD4+ T cell responses in dengue-endemic areas

Grifoni A, Angelo MA, Lopez B, O’Rourke PH, Sidney J, Cerpas C, Balmaseda A, Silveira CGT, Maestri A, Costa PR, Durbin AP, Diehl SA, Phillips E, Mallal S, De Silva AD, Nchinda G, Nkenfou C, Collins MH, de Silva AM, Lim MQ, Macary PA, Tatullo F, Solomon T, Satchidanandam V, Desai A, Ravi V, Coloma J, Turtle L, Rivino L, Kallas EG, Peters B, Harris E, Sette A, Weiskopf D

Oct 4, 2017 J Virol

Prior dengue virus exposure shapes T cell immunity to zika virus in humans

Grifoni A, Pham J, Sidney J, O'Rourke PH, Paul S, Peters B, Martini SR, de Silva AD, Ricciardi MJ, Magnani DM, Silveira CGT, Maestri A, Costa PR, de-Oliveira-Pinto LM, de Azeredo EL, Damasco PV, Phillips E, Mallal S, de Silva AM, Collins M, Durbin A, Diehl SA, Cerpas C, Balmaseda A, Kuan G, Coloma J, Harris E, Crowe JE Jr, Stone M, Norris PJ, Busch M, Vivanco-Cid H, Cox J, Graham BS, Ledgerwood JE, Turtle L, Solomon T, Kallas EG, Watkins D, Weiskopf D, Sette A

Sep 21, 2017 EMBO Mol Med

Profiling MHC II immunopeptidome of blood-stage malaria reveals that cDC1 control the functionality of parasiste-specific CD4 T cells

Draheim M, Wlodarczyk MF, Crozat K, Saliou JM, Alayi TD, Tomavo S, Hassan A, Salvioni A, Demarta-Gatsi C, Sidney J, Sette A, Dalod M, Berry A, Silvie O, Blanchard N